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Blast searches using features/annotations of a sequence 
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Post Blast searches using features/annotations of a sequence
You do not have to search with the full sequence against the NCBI's blast databases. If you select a feature and then run DATABASE > INTERNET BLAST SEARCH then it will by default just search with that feature. Incidentally if you are searching with a very short sequence you probably want to tweak the settings (click MORE CHOICES), for example reduce the E-value.


Tue Aug 05, 2008 12:04 pm
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